pomera-ai-commander 1.2.8 → 1.2.10

package/README.md

@@ -1,129 +1,153 @@
-# Pomera AI Commander (PAC)
+# MCP Registry
 
-<p align="center">
-  <img src="resources/icon.png" alt="Pomera - the fluffy Pomeranian mascot" width="128" height="128">
-</p>
+The MCP registry provides MCP clients with a list of MCP servers, like an app store for MCP servers.
 
-[![Download Latest Release](https://img.shields.io/badge/Download-Latest%20Release-blue?style=for-the-badge&logo=github)](https://github.com/matbanik/Pomera-AI-Commander/releases)
+[**📤 Publish my MCP server**](docs/modelcontextprotocol-io/quickstart.mdx) | [**⚡️ Live API docs**](https://registry.modelcontextprotocol.io/docs) | [**👀 Ecosystem vision**](docs/design/ecosystem-vision.md) | 📖 **[Full documentation](./docs)**
 
-A desktop text "workbench" + MCP server: clean, transform, extract, and analyze text fast—manually in a GUI or programmatically from AI assistants (Cursor / Claude Desktop / MCP clients).
+## Development Status
 
-> Hook: Stop pasting text into 10 random websites. Pomera gives you one place (GUI + MCP) to do the 90% text ops you repeat every week.
+**2025-10-24 update**: The Registry API has entered an **API freeze (v0.1)** 🎉. For the next month or more, the API will remain stable with no breaking changes, allowing integrators to confidently implement support. This freeze applies to v0.1 while development continues on v0. We'll use this period to validate the API in real-world integrations and gather feedback to shape v1 for general availability. Thank you to everyone for your contributions and patience—your involvement has been key to getting us here!
 
-[Download latest release](https://github.com/matbanik/Pomera-AI-Commander/releases) · Docs: [Tools](docs/TOOLS_DOCUMENTATION.md) · [MCP Guide](docs/MCP_SERVER_GUIDE.md) · [Troubleshooting](docs/TROUBLESHOOTING.md)
+**2025-09-08 update**: The registry has launched in preview 🎉 ([announcement blog post](https://blog.modelcontextprotocol.io/posts/2025-09-08-mcp-registry-preview/)). While the system is now more stable, this is still a preview release and breaking changes or data resets may occur. A general availability (GA) release will follow later. We'd love your feedback in [GitHub discussions](https://github.com/modelcontextprotocol/registry/discussions/new?category=ideas) or in the [#registry-dev Discord](https://discord.com/channels/1358869848138059966/1369487942862504016) ([joining details here](https://modelcontextprotocol.io/community/communication)).
 
----
+Current key maintainers:
+- **Adam Jones** (Anthropic) [@domdomegg](https://github.com/domdomegg)  
+- **Tadas Antanavicius** (PulseMCP) [@tadasant](https://github.com/tadasant)
+- **Toby Padilla** (GitHub) [@toby](https://github.com/toby)
+- **Radoslav (Rado) Dimitrov** (Stacklok) [@rdimitrov](https://github.com/rdimitrov)
 
-## 60-second demo (what to expect)
-![Messy text → clean output → extracted URLs/emails → ready to ship](PAC.gif)
+## Contributing
 
-**Best-for workflows**
-- Cleaning pasted logs / PDFs (whitespace, wrapping, stats)
-- Extracting emails/URLs/IDs via regex
-- Normalizing case, sorting, columns
-- Hashing/encoding utilities
-- Letting Cursor/Claude call these as MCP tools in a repeatable pipeline
+We use multiple channels for collaboration - see [modelcontextprotocol.io/community/communication](https://modelcontextprotocol.io/community/communication).
 
----
+Often (but not always) ideas flow through this pipeline:
 
-## Prerequisites
+- **[Discord](https://modelcontextprotocol.io/community/communication)** - Real-time community discussions
+- **[Discussions](https://github.com/modelcontextprotocol/registry/discussions)** - Propose and discuss product/technical requirements
+- **[Issues](https://github.com/modelcontextprotocol/registry/issues)** - Track well-scoped technical work  
+- **[Pull Requests](https://github.com/modelcontextprotocol/registry/pulls)** - Contribute work towards issues
 
-**Python 3.8+** is required for all installation methods.
+### Quick start:
 
-### macOS (Homebrew)
-```bash
-# Tkinter support (replace @3.14 with your Python version)
-brew install python-tk@3.14
-pip3 install requests reportlab python-docx
-```
+#### Pre-requisites
+
+- **Docker**
+- **Go 1.24.x**
+- **ko** - Container image builder for Go ([installation instructions](https://ko.build/install/))
+- **golangci-lint v2.4.0**
+
+#### Running the server
 
-### Ubuntu/Debian
 ```bash
-sudo apt-get install python3-tk
-pip3 install requests reportlab python-docx
+# Start full development environment
+make dev-compose
 ```
 
-### Windows
-Tkinter is included with Python from [python.org](https://python.org).
-```cmd
-pip install requests reportlab python-docx
-```
+This starts the registry at [`localhost:8080`](http://localhost:8080) with PostgreSQL. The database uses ephemeral storage and is reset each time you restart the containers, ensuring a clean state for development and testing.
+
+**Note:** The registry uses [ko](https://ko.build) to build container images. The `make dev-compose` command automatically builds the registry image with ko and loads it into your local Docker daemon before starting the services.
 
-> **Note:** For PEP 668 protected environments, use `pip3 install --user` or a virtual environment.
+By default, the registry seeds from the production API with a filtered subset of servers (to keep startup fast). This ensures your local environment mirrors production behavior and all seed data passes validation. For offline development you can seed from a file without validation with `MCP_REGISTRY_SEED_FROM=data/seed.json MCP_REGISTRY_ENABLE_REGISTRY_VALIDATION=false make dev-compose`.
 
----
+The setup can be configured with environment variables in [docker-compose.yml](./docker-compose.yml) - see [.env.example](./.env.example) for a reference.
 
-## Install / Run
-### Option A — Prebuilt executable (recommended)
-[Download from Releases](https://github.com/matbanik/Pomera-AI-Commander/releases) and run.
+<details>
+<summary>Alternative: Running a pre-built Docker image</summary>
+
+Pre-built Docker images are automatically published to GitHub Container Registry:
 
-### Option B — Python (PyPI)
 ```bash
-pip install pomera-ai-commander
-# then run:
-pomera-ai-commander --help
+# Run latest stable release
+docker run -p 8080:8080 ghcr.io/modelcontextprotocol/registry:latest
+
+# Run latest from main branch (continuous deployment)
+docker run -p 8080:8080 ghcr.io/modelcontextprotocol/registry:main
+
+# Run specific release version
+docker run -p 8080:8080 ghcr.io/modelcontextprotocol/registry:v1.0.0
+
+# Run development build from main branch
+docker run -p 8080:8080 ghcr.io/modelcontextprotocol/registry:main-20250906-abc123d
 ```
 
-### Option C — Node.js (npm)
+**Available tags:** 
+- **Releases**: `latest`, `v1.0.0`, `v1.1.0`, etc.
+- **Continuous**: `main` (latest main branch build)
+- **Development**: `main-<date>-<sha>` (specific commit builds)
+
+</details>
+
+#### Publishing a server
+
+To publish a server, we've built a simple CLI. You can use it with:
+
 ```bash
-npm install -g pomera-ai-commander
-# then run:
-pomera-mcp --help
+# Build the latest CLI
+make publisher
+
+# Use it!
+./bin/mcp-publisher --help
 ```
 
-### Create Desktop Shortcut
-After installing via pip or npm, create a desktop shortcut for quick access:
+See [the publisher guide](./docs/modelcontextprotocol-io/quickstart.mdx) for more details.
 
-```bash
-# For pip install:
-pomera-create-shortcut
+#### Other commands
 
-# For npm install (from package directory):
-python create_shortcut.py
+```bash
+# Run lint, unit tests and integration tests
+make check
 ```
 
----
+There are also a few more helpful commands for development. Run `make help` to learn more, or look in [Makefile](./Makefile).
 
-## MCP Server for AI Assistants
+<!--
+For Claude and other AI tools: Always prefer make targets over custom commands where possible.
+-->
 
-Pomera exposes 22 text processing tools via MCP. Configure your AI assistant:
+## Architecture
 
-**Cursor** (`.cursor/mcp.json`):
-```json
-{
-  "mcpServers": {
-    "pomera": {
-      "command": "pomera-ai-commander"
-    }
-  }
-}
-```
+### Project Structure
 
-**Claude Desktop** (`claude_desktop_config.json`):
-```json
-{
-  "mcpServers": {
-    "pomera": {
-      "command": "pomera-ai-commander"
-    }
-  }
-}
 ```
+├── cmd/                     # Application entry points
+│   └── publisher/           # Server publishing tool
+├── data/                    # Seed data
+├── deploy/                  # Deployment configuration (Pulumi)
+├── docs/                    # Documentation
+├── internal/                # Private application code
+│   ├── api/                 # HTTP handlers and routing
+│   ├── auth/                # Authentication (GitHub OAuth, JWT, namespace blocking)
+│   ├── config/              # Configuration management
+│   ├── database/            # Data persistence (PostgreSQL)
+│   ├── service/             # Business logic
+│   ├── telemetry/           # Metrics and monitoring
+│   └── validators/          # Input validation
+├── pkg/                     # Public packages
+│   ├── api/                 # API types and structures
+│   │   └── v0/              # Version 0 API types
+│   └── model/               # Data models for server.json
+├── scripts/                 # Development and testing scripts
+├── tests/                   # Integration tests
+└── tools/                   # CLI tools and utilities
+    └── validate-*.sh        # Schema validation tools
+```
+
+### Authentication
+
+Publishing supports multiple authentication methods:
+- **GitHub OAuth** - For publishing by logging into GitHub
+- **GitHub OIDC** - For publishing from GitHub Actions
+- **DNS verification** - For proving ownership of a domain and its subdomains
+- **HTTP verification** - For proving ownership of a domain
 
-> **💡 Tip:** If the simple command doesn't work, use the full path. Find it with:
-> ```bash
-> # For npm install:
-> npm root -g
-> # Then use: <result>/pomera-ai-commander/pomera_mcp_server.py
->
-> # For pip install:
-> pip show pomera-ai-commander | grep Location
-> ```
+The registry validates namespace ownership when publishing. E.g. to publish...:
+- `io.github.domdomegg/my-cool-mcp` you must login to GitHub as `domdomegg`, or be in a GitHub Action on domdomegg's repos
+- `me.adamjones/my-cool-mcp` you must prove ownership of `adamjones.me` via DNS or HTTP challenge
 
-See the full [MCP Server Guide](docs/MCP_SERVER_GUIDE.md) for Antigravity, executable configs, and troubleshooting.
+## Community Projects
 
----
+Check out [community projects](docs/community-projects.md) to explore notable registry-related work created by the community.
 
-## License
+## More documentation
 
-MIT License - see [LICENSE](LICENSE) for details.
+See the [documentation](./docs) for more details if your question has not been answered here!

package/core/database_schema.py

@@ -398,6 +398,21 @@ class DataTypeConverter:
         """
         import json
         
+        # Handle None or empty string for all types
+        if value_str is None or value_str == '':
+            if data_type in ('json', 'array'):
+                return [] if data_type == 'array' else {}
+            elif data_type == 'str':
+                return ''
+            elif data_type == 'int':
+                return 0
+            elif data_type == 'float':
+                return 0.0
+            elif data_type == 'bool':
+                return False
+            else:
+                return ''
+        
         if data_type == 'str':
             return value_str
         elif data_type == 'int':
@@ -407,6 +422,14 @@ class DataTypeConverter:
         elif data_type == 'bool':
             return value_str == '1'
         elif data_type in ('json', 'array'):
-            return json.loads(value_str)
+            # Handle whitespace-only strings as empty
+            if not value_str.strip():
+                return [] if data_type == 'array' else {}
+            try:
+                return json.loads(value_str)
+            except json.JSONDecodeError as e:
+                # Debug: print what value caused the error
+                print(f"DEBUG: JSON parse failed for data_type='{data_type}': value_str='{value_str[:100]}...' error={e}")
+                return [] if data_type == 'array' else {}
         else:
             return value_str  # Fallback to string

package/core/database_schema_manager.py

@@ -308,8 +308,10 @@ class DatabaseSchemaManager:
             for index_sql in table_indexes:
                 # Extract index name from CREATE INDEX statement
                 parts = index_sql.split()
-                if len(parts) >= 5 and parts[0].upper() == "CREATE" and parts[1].upper() == "INDEX":
-                    index_name = parts[4]  # "CREATE INDEX IF NOT EXISTS index_name"
+                # "CREATE INDEX IF NOT EXISTS idx_name ON table(...)"
+                # parts: [0]=CREATE [1]=INDEX [2]=IF [3]=NOT [4]=EXISTS [5]=idx_name
+                if len(parts) >= 6 and parts[0].upper() == "CREATE" and parts[1].upper() == "INDEX":
+                    index_name = parts[5]  # After "CREATE INDEX IF NOT EXISTS"
                     expected_indexes.add(index_name)
         
         # Get existing indexes

package/core/database_settings_manager.py

@@ -143,6 +143,27 @@ class NestedSettingsProxy:
         """Return a copy of the underlying data as a regular dictionary."""
         return self._data.copy()
     
+    def pop(self, key: str, *args):
+        """Remove and return a value from the nested settings.
+        
+        Args:
+            key: Key to remove
+            *args: Optional default value if key not found
+            
+        Returns:
+            The removed value, or default if provided and key not found
+        """
+        if args:
+            result = self._data.pop(key, args[0])
+        else:
+            result = self._data.pop(key)
+        
+        # Save the change to database
+        full_path = f"{self._parent_key}"
+        self._settings_manager.set_setting(full_path, self._data)
+        
+        return result
+    
     def _update_nested_value(self, data: Dict[str, Any], path: str, value: Any) -> None:
         """Update value in nested dictionary using dot notation."""
         keys = path.split('.')
@@ -1112,8 +1133,10 @@ class DatabaseSettingsManager:
                 
                 critical_issues = [i for i in issues if i.severity == 'critical']
                 if critical_issues:
-                    self.logger.error(f"Imported settings have {len(critical_issues)} critical issues")
-                    return False
+                    # Log specific issues for debugging but allow import to proceed
+                    for issue in critical_issues:
+                        self.logger.warning(f"Import validation issue: {issue.location} - {issue.message}")
+                    self.logger.warning(f"Imported settings have {len(critical_issues)} validation issues - proceeding anyway")
             
             # Save imported settings
             success = self.save_settings(settings_data)

package/core/dialog_manager.py

@@ -283,8 +283,8 @@ class DialogManager:
             try:
                 dialog_settings = self.settings_manager.get_setting("dialog_settings", {})
                 
-                # Validate settings structure
-                if not isinstance(dialog_settings, dict):
+                # Validate settings structure - accept dict or dict-like objects (NestedSettingsProxy)
+                if not isinstance(dialog_settings, dict) and not hasattr(dialog_settings, 'get'):
                     self.logger.warning(f"Invalid dialog_settings structure: {type(dialog_settings)}, using defaults")
                     return True
                 
@@ -663,8 +663,8 @@ class DialogManager:
             # Force a fresh read of dialog settings
             dialog_settings = self.settings_manager.get_setting("dialog_settings", {})
             
-            # Validate settings structure
-            if not isinstance(dialog_settings, dict):
+            # Validate settings structure - accept dict or dict-like objects (NestedSettingsProxy)
+            if not isinstance(dialog_settings, dict) and not hasattr(dialog_settings, 'get'):
                 self.logger.error(f"Invalid dialog_settings structure: {type(dialog_settings)}, skipping refresh")
                 return
                 

package/core/efficient_line_numbers.py

@@ -9,6 +9,7 @@ from tkinter import scrolledtext
 import platform
 import time
 import threading
+import hashlib
 from typing import Dict, List, Tuple, Optional, Any
 from dataclasses import dataclass
 
@@ -31,7 +32,7 @@ class EfficientLineNumbers(tk.Frame):
         
         # Configuration
         self.line_number_width = 50  # Adjustable width
-        self.debounce_delay = 5  # ms - very responsive updates
+        self.debounce_delay = 50  # ms - balanced responsiveness vs. efficiency
         self.cache_size_limit = 1000  # Maximum cached line positions
         
         # Create widgets
@@ -280,12 +281,12 @@ class EfficientLineNumbers(tk.Frame):
             return None
     
     def _get_content_hash(self) -> str:
-        """Get a hash of the current content for change detection."""
+        """Get a hash of the current content for change detection using MD5."""
         try:
             content = self.text.get("1.0", "end-1c")
-            # Simple hash based on content length and first/last chars
             if content:
-                return f"{len(content)}_{content[:10]}_{content[-10:]}"
+                # Use MD5 for reliable change detection (truncated for efficiency)
+                return hashlib.md5(content.encode('utf-8', errors='replace')).hexdigest()[:16]
             return "empty"
         except Exception:
             return "error"